org.biojava.bio.seq.io.agave
Class AGAVETranscriptHandler
java.lang.Object
org.biojava.bio.seq.io.agave.StAXContentHandlerBase
org.biojava.bio.seq.io.agave.StAXFeatureHandler
org.biojava.bio.seq.io.agave.AGAVETranscriptHandler
- All Implemented Interfaces:
- AGAVEEvidenceCallbackItf, StAXContentHandler
public class AGAVETranscriptHandler
- extends StAXFeatureHandler
- implements AGAVEEvidenceCallbackItf
transcript
- Author:
- Hanning Ni Doubletwist Inc
Methods inherited from class org.biojava.bio.seq.io.agave.StAXFeatureHandler |
addFeatureToSequence, addHandler, createTemplate, endElement, endElementHandler, getFeatureListener, getHandlerStackIterator, getLevel, pop, push, realizeSubFeatures, setFeatureListener, setHandlerCharacteristics, setProperty, startElement |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
AGAVE_TRANSCRIPT_HANDLER_FACTORY
public static final StAXHandlerFactory AGAVE_TRANSCRIPT_HANDLER_FACTORY
addElementId
public void addElementId(String id)
- Specified by:
addElementId
in interface AGAVEEvidenceCallbackItf
startElementHandler
public void startElementHandler(String nsURI,
String localName,
String qName,
Attributes attrs)
throws SAXException
- Description copied from class:
StAXFeatureHandler
- Element-specific handler.
Subclass this to do something useful!
- Overrides:
startElementHandler
in class StAXFeatureHandler
- Throws:
SAXException