report.rb

Path: lib/bio/appl/spidey/report.rb
Last Update: Thu Feb 18 18:16:45 +0000 2010

bio/appl/spidey/report.rb - SPIDEY result parser

Copyright:Copyright (C) 2004 GOTO Naohisa <ng@bioruby.org>
License:The Ruby License
 $Id: report.rb,v 1.10 2007/04/05 23:35:40 trevor Exp $

NCBI Spidey result parser. Currently, output of default (-p 0 option) or -p 1 option are supported.

Notes

The mRNA sequence is regarded as a query, and the enomic sequence is regarded as a target (subject, hit).

References

Required files

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