Class Bio::Fasta::Report::Program
In: lib/bio/appl/fasta/format10.rb
Parent: Object

Log of the fasta execution environments.

Methods

new  

Attributes

definition  [R]  Returns a String containing query and library filenames.
program  [R]  Accessor for a Hash containing ‘mp_name’, ‘mp_ver’, ‘mp_argv’, ‘pg_name’, ‘pg_ver, ‘pg_matrix’, ‘pg_gap-pen’, ‘pg_ktup’, ‘pg_optcut’, ‘pg_cgap’, ‘mp_extrap’, ‘mp_stats’, and ‘mp_KS’ values.

Public Class methods

[Source]

     # File lib/bio/appl/fasta/format10.rb, line 177
177:     def initialize(data)
178:       @definition, *program = data.split(/\n/)
179:       @program = {}
180: 
181:       pat = /;\s+([^:]+):\s+(.*)/
182: 
183:       program.each do |x|
184:         if pat.match(x)
185:           @program[$1] = $2
186:         end
187:       end
188:     end

[Validate]