Multiple seaquece alignment using ClustalW.
Examples
serv = Bio::DDBJ::XML::ClustalW.new
query = <<END
> RABSTOUT rabbit Guinness receptor
LKMHLMGHLKMGLKMGLKGMHLMHLKHMHLMTYTYTTYRRWPLWMWLPDFGHAS
ADSCVCAHGFAVCACFAHFDVCFGAVCFHAVCFAHVCFAAAVCFAVCAC
> MUSNOSE mouse nose drying factor
mhkmmhkgmkhmhgmhmhglhmkmhlkmgkhmgkmkytytytryrwtqtqwtwyt
fdgfdsgafdagfdgfsagdfavdfdvgavfsvfgvdfsvdgvagvfdv
> HSHEAVEN human Guinness receptor repeat
mhkmmhkgmkhmhgmhmhg lhmkmhlkmgkhmgkmk ytytytryrwtqtqwtwyt
fdgfdsgafdagfdgfsag dfavdfdvgavfsvfgv dfsvdgvagvfdv
mhkmmhkgmkhmhgmhmhg lhmkmhlkmgkhmgkmk ytytytryrwtqtqwtwyt
fdgfdsgafdagfdgfsag dfavdfdvgavfsvfgv dfsvdgvagvfdv
END
puts serv.analyzeSimple(query)
puts serv.analyzeParam(query, '-align -matrix=blosum')
WSDL Methods
- analyzeSimple(query)
- analyzeParam(query, param)